updated the UI code ✅✅
Browse files- mediSync/app.py +46 -404
mediSync/app.py
CHANGED
|
@@ -3,391 +3,6 @@ import os
|
|
| 3 |
import sys
|
| 4 |
import tempfile
|
| 5 |
from pathlib import Path
|
| 6 |
-
|
| 7 |
-
import gradio as gr
|
| 8 |
-
import matplotlib.pyplot as plt
|
| 9 |
-
from PIL import Image
|
| 10 |
-
|
| 11 |
-
# Add parent directory to path
|
| 12 |
-
parent_dir = os.path.dirname(os.path.abspath(__file__))
|
| 13 |
-
sys.path.append(parent_dir)
|
| 14 |
-
|
| 15 |
-
# Import our modules
|
| 16 |
-
from models.multimodal_fusion import MultimodalFusion
|
| 17 |
-
from utils.preprocessing import enhance_xray_image, normalize_report_text
|
| 18 |
-
from utils.visualization import (
|
| 19 |
-
plot_image_prediction,
|
| 20 |
-
plot_multimodal_results,
|
| 21 |
-
plot_report_entities,
|
| 22 |
-
)
|
| 23 |
-
|
| 24 |
-
# Set up logging
|
| 25 |
-
logging.basicConfig(
|
| 26 |
-
level=logging.INFO,
|
| 27 |
-
format="%(asctime)s - %(name)s - %(levelname)s - %(message)s",
|
| 28 |
-
handlers=[logging.StreamHandler(), logging.FileHandler("mediSync.log")],
|
| 29 |
-
)
|
| 30 |
-
logger = logging.getLogger(__name__)
|
| 31 |
-
|
| 32 |
-
# Create temporary directory for sample data if it doesn't exist
|
| 33 |
-
os.makedirs(os.path.join(parent_dir, "data", "sample"), exist_ok=True)
|
| 34 |
-
|
| 35 |
-
|
| 36 |
-
# class MediSyncApp:
|
| 37 |
-
# """
|
| 38 |
-
# Main application class for the MediSync multi-modal medical analysis system.
|
| 39 |
-
# """
|
| 40 |
-
|
| 41 |
-
# def __init__(self):
|
| 42 |
-
# """Initialize the application and load models."""
|
| 43 |
-
# self.logger = logging.getLogger(__name__)
|
| 44 |
-
# self.logger.info("Initializing MediSync application")
|
| 45 |
-
|
| 46 |
-
# # Initialize models with None for lazy loading
|
| 47 |
-
# self.fusion_model = None
|
| 48 |
-
# self.image_model = None
|
| 49 |
-
# self.text_model = None
|
| 50 |
-
|
| 51 |
-
# def load_models(self):
|
| 52 |
-
# """
|
| 53 |
-
# Load models if not already loaded.
|
| 54 |
-
|
| 55 |
-
# Returns:
|
| 56 |
-
# bool: True if models loaded successfully, False otherwise
|
| 57 |
-
# """
|
| 58 |
-
# try:
|
| 59 |
-
# if self.fusion_model is None:
|
| 60 |
-
# self.logger.info("Loading models...")
|
| 61 |
-
# self.fusion_model = MultimodalFusion()
|
| 62 |
-
# self.image_model = self.fusion_model.image_analyzer
|
| 63 |
-
# self.text_model = self.fusion_model.text_analyzer
|
| 64 |
-
# self.logger.info("Models loaded successfully")
|
| 65 |
-
# return True
|
| 66 |
-
|
| 67 |
-
# except Exception as e:
|
| 68 |
-
# self.logger.error(f"Error loading models: {e}")
|
| 69 |
-
# return False
|
| 70 |
-
|
| 71 |
-
# def analyze_image(self, image):
|
| 72 |
-
# """
|
| 73 |
-
# Analyze a medical image.
|
| 74 |
-
|
| 75 |
-
# Args:
|
| 76 |
-
# image: Image file uploaded through Gradio
|
| 77 |
-
|
| 78 |
-
# Returns:
|
| 79 |
-
# tuple: (image, image_results_html, plot_as_html)
|
| 80 |
-
# """
|
| 81 |
-
# try:
|
| 82 |
-
# # Ensure models are loaded
|
| 83 |
-
# if not self.load_models() or self.image_model is None:
|
| 84 |
-
# return image, "Error: Models not loaded properly.", None
|
| 85 |
-
|
| 86 |
-
# # Save uploaded image to a temporary file
|
| 87 |
-
# temp_dir = tempfile.mkdtemp()
|
| 88 |
-
# temp_path = os.path.join(temp_dir, "upload.png")
|
| 89 |
-
|
| 90 |
-
# if isinstance(image, str):
|
| 91 |
-
# # Copy the file if it's a path
|
| 92 |
-
# from shutil import copyfile
|
| 93 |
-
|
| 94 |
-
# copyfile(image, temp_path)
|
| 95 |
-
# else:
|
| 96 |
-
# # Save if it's a Gradio UploadButton image
|
| 97 |
-
# image.save(temp_path)
|
| 98 |
-
|
| 99 |
-
# # Run image analysis
|
| 100 |
-
# self.logger.info(f"Analyzing image: {temp_path}")
|
| 101 |
-
# results = self.image_model.analyze(temp_path)
|
| 102 |
-
|
| 103 |
-
# # Create visualization
|
| 104 |
-
# fig = plot_image_prediction(
|
| 105 |
-
# image,
|
| 106 |
-
# results.get("predictions", []),
|
| 107 |
-
# f"Primary Finding: {results.get('primary_finding', 'Unknown')}",
|
| 108 |
-
# )
|
| 109 |
-
|
| 110 |
-
# # Convert to HTML for display
|
| 111 |
-
# plot_html = self.fig_to_html(fig)
|
| 112 |
-
|
| 113 |
-
# # Format results as HTML
|
| 114 |
-
# html_result = f"""
|
| 115 |
-
# <h2>X-ray Analysis Results</h2>
|
| 116 |
-
# <p><strong>Primary Finding:</strong> {results.get("primary_finding", "Unknown")}</p>
|
| 117 |
-
# <p><strong>Confidence:</strong> {results.get("confidence", 0):.1%}</p>
|
| 118 |
-
# <p><strong>Abnormality Detected:</strong> {"Yes" if results.get("has_abnormality", False) else "No"}</p>
|
| 119 |
-
|
| 120 |
-
# <h3>Top Predictions:</h3>
|
| 121 |
-
# <ul>
|
| 122 |
-
# """
|
| 123 |
-
|
| 124 |
-
# # Add top 5 predictions
|
| 125 |
-
# for label, prob in results.get("predictions", [])[:5]:
|
| 126 |
-
# html_result += f"<li>{label}: {prob:.1%}</li>"
|
| 127 |
-
|
| 128 |
-
# html_result += "</ul>"
|
| 129 |
-
|
| 130 |
-
# # Add explanation
|
| 131 |
-
# explanation = self.image_model.get_explanation(results)
|
| 132 |
-
# html_result += f"<h3>Analysis Explanation:</h3><p>{explanation}</p>"
|
| 133 |
-
|
| 134 |
-
# return image, html_result, plot_html
|
| 135 |
-
|
| 136 |
-
# except Exception as e:
|
| 137 |
-
# self.logger.error(f"Error in image analysis: {e}")
|
| 138 |
-
# return image, f"Error analyzing image: {str(e)}", None
|
| 139 |
-
|
| 140 |
-
# def analyze_text(self, text):
|
| 141 |
-
# """
|
| 142 |
-
# Analyze a medical report text.
|
| 143 |
-
|
| 144 |
-
# Args:
|
| 145 |
-
# text: Report text input through Gradio
|
| 146 |
-
|
| 147 |
-
# Returns:
|
| 148 |
-
# tuple: (text, text_results_html, entities_plot_html)
|
| 149 |
-
# """
|
| 150 |
-
# try:
|
| 151 |
-
# # Ensure models are loaded
|
| 152 |
-
# if not self.load_models() or self.text_model is None:
|
| 153 |
-
# return text, "Error: Models not loaded properly.", None
|
| 154 |
-
|
| 155 |
-
# # Check for empty text
|
| 156 |
-
# if not text or len(text.strip()) < 10:
|
| 157 |
-
# return (
|
| 158 |
-
# text,
|
| 159 |
-
# "Error: Please enter a valid medical report text (at least 10 characters).",
|
| 160 |
-
# None,
|
| 161 |
-
# )
|
| 162 |
-
|
| 163 |
-
# # Normalize text
|
| 164 |
-
# normalized_text = normalize_report_text(text)
|
| 165 |
-
|
| 166 |
-
# # Run text analysis
|
| 167 |
-
# self.logger.info("Analyzing medical report text")
|
| 168 |
-
# results = self.text_model.analyze(normalized_text)
|
| 169 |
-
|
| 170 |
-
# # Get entities and create visualization
|
| 171 |
-
# entities = results.get("entities", {})
|
| 172 |
-
# fig = plot_report_entities(normalized_text, entities)
|
| 173 |
-
|
| 174 |
-
# # Convert to HTML for display
|
| 175 |
-
# entities_plot_html = self.fig_to_html(fig)
|
| 176 |
-
|
| 177 |
-
# # Format results as HTML
|
| 178 |
-
# html_result = f"""
|
| 179 |
-
# <h2>Medical Report Analysis Results</h2>
|
| 180 |
-
# <p><strong>Severity Level:</strong> {results.get("severity", {}).get("level", "Unknown")}</p>
|
| 181 |
-
# <p><strong>Severity Score:</strong> {results.get("severity", {}).get("score", 0)}/4</p>
|
| 182 |
-
# <p><strong>Confidence:</strong> {results.get("severity", {}).get("confidence", 0):.1%}</p>
|
| 183 |
-
|
| 184 |
-
# <h3>Key Findings:</h3>
|
| 185 |
-
# <ul>
|
| 186 |
-
# """
|
| 187 |
-
|
| 188 |
-
# # Add findings
|
| 189 |
-
# findings = results.get("findings", [])
|
| 190 |
-
# if findings:
|
| 191 |
-
# for finding in findings:
|
| 192 |
-
# html_result += f"<li>{finding}</li>"
|
| 193 |
-
# else:
|
| 194 |
-
# html_result += "<li>No specific findings detailed.</li>"
|
| 195 |
-
|
| 196 |
-
# html_result += "</ul>"
|
| 197 |
-
|
| 198 |
-
# # Add entities
|
| 199 |
-
# html_result += "<h3>Extracted Medical Entities:</h3>"
|
| 200 |
-
|
| 201 |
-
# for category, items in entities.items():
|
| 202 |
-
# if items:
|
| 203 |
-
# html_result += f"<p><strong>{category.capitalize()}:</strong> {', '.join(items)}</p>"
|
| 204 |
-
|
| 205 |
-
# # Add follow-up recommendations
|
| 206 |
-
# html_result += "<h3>Follow-up Recommendations:</h3><ul>"
|
| 207 |
-
# followups = results.get("followup_recommendations", [])
|
| 208 |
-
|
| 209 |
-
# if followups:
|
| 210 |
-
# for rec in followups:
|
| 211 |
-
# html_result += f"<li>{rec}</li>"
|
| 212 |
-
# else:
|
| 213 |
-
# html_result += "<li>No specific follow-up recommendations.</li>"
|
| 214 |
-
|
| 215 |
-
# html_result += "</ul>"
|
| 216 |
-
|
| 217 |
-
# return text, html_result, entities_plot_html
|
| 218 |
-
|
| 219 |
-
# except Exception as e:
|
| 220 |
-
# self.logger.error(f"Error in text analysis: {e}")
|
| 221 |
-
# return text, f"Error analyzing text: {str(e)}", None
|
| 222 |
-
|
| 223 |
-
# def analyze_multimodal(self, image, text):
|
| 224 |
-
# """
|
| 225 |
-
# Perform multimodal analysis of image and text.
|
| 226 |
-
|
| 227 |
-
# Args:
|
| 228 |
-
# image: Image file uploaded through Gradio
|
| 229 |
-
# text: Report text input through Gradio
|
| 230 |
-
|
| 231 |
-
# Returns:
|
| 232 |
-
# tuple: (results_html, multimodal_plot_html)
|
| 233 |
-
# """
|
| 234 |
-
# try:
|
| 235 |
-
# # Ensure models are loaded
|
| 236 |
-
# if not self.load_models() or self.fusion_model is None:
|
| 237 |
-
# return "Error: Models not loaded properly.", None
|
| 238 |
-
|
| 239 |
-
# # Check for empty inputs
|
| 240 |
-
# if image is None:
|
| 241 |
-
# return "Error: Please upload an X-ray image for analysis.", None
|
| 242 |
-
|
| 243 |
-
# if not text or len(text.strip()) < 10:
|
| 244 |
-
# return (
|
| 245 |
-
# "Error: Please enter a valid medical report text (at least 10 characters).",
|
| 246 |
-
# None,
|
| 247 |
-
# )
|
| 248 |
-
|
| 249 |
-
# # Save uploaded image to a temporary file
|
| 250 |
-
# temp_dir = tempfile.mkdtemp()
|
| 251 |
-
# temp_path = os.path.join(temp_dir, "upload.png")
|
| 252 |
-
|
| 253 |
-
# if isinstance(image, str):
|
| 254 |
-
# # Copy the file if it's a path
|
| 255 |
-
# from shutil import copyfile
|
| 256 |
-
|
| 257 |
-
# copyfile(image, temp_path)
|
| 258 |
-
# else:
|
| 259 |
-
# # Save if it's a Gradio UploadButton image
|
| 260 |
-
# image.save(temp_path)
|
| 261 |
-
|
| 262 |
-
# # Normalize text
|
| 263 |
-
# normalized_text = normalize_report_text(text)
|
| 264 |
-
|
| 265 |
-
# # Run multimodal analysis
|
| 266 |
-
# self.logger.info("Performing multimodal analysis")
|
| 267 |
-
# results = self.fusion_model.analyze(temp_path, normalized_text)
|
| 268 |
-
|
| 269 |
-
# # Create visualization
|
| 270 |
-
# fig = plot_multimodal_results(results, image, text)
|
| 271 |
-
|
| 272 |
-
# # Convert to HTML for display
|
| 273 |
-
# plot_html = self.fig_to_html(fig)
|
| 274 |
-
|
| 275 |
-
# # Generate explanation
|
| 276 |
-
# explanation = self.fusion_model.get_explanation(results)
|
| 277 |
-
|
| 278 |
-
# # Format results as HTML
|
| 279 |
-
# html_result = f"""
|
| 280 |
-
# <h2>Multimodal Medical Analysis Results</h2>
|
| 281 |
-
|
| 282 |
-
# <h3>Overview</h3>
|
| 283 |
-
# <p><strong>Primary Finding:</strong> {results.get("primary_finding", "Unknown")}</p>
|
| 284 |
-
# <p><strong>Severity Level:</strong> {results.get("severity", {}).get("level", "Unknown")}</p>
|
| 285 |
-
# <p><strong>Severity Score:</strong> {results.get("severity", {}).get("score", 0)}/4</p>
|
| 286 |
-
# <p><strong>Agreement Score:</strong> {results.get("agreement_score", 0):.0%}</p>
|
| 287 |
-
|
| 288 |
-
# <h3>Detailed Findings</h3>
|
| 289 |
-
# <ul>
|
| 290 |
-
# """
|
| 291 |
-
|
| 292 |
-
# # Add findings
|
| 293 |
-
# findings = results.get("findings", [])
|
| 294 |
-
# if findings:
|
| 295 |
-
# for finding in findings:
|
| 296 |
-
# html_result += f"<li>{finding}</li>"
|
| 297 |
-
# else:
|
| 298 |
-
# html_result += "<li>No specific findings detailed.</li>"
|
| 299 |
-
|
| 300 |
-
# html_result += "</ul>"
|
| 301 |
-
|
| 302 |
-
# # Add follow-up recommendations
|
| 303 |
-
# html_result += "<h3>Recommended Follow-up</h3><ul>"
|
| 304 |
-
# followups = results.get("followup_recommendations", [])
|
| 305 |
-
|
| 306 |
-
# if followups:
|
| 307 |
-
# for rec in followups:
|
| 308 |
-
# html_result += f"<li>{rec}</li>"
|
| 309 |
-
# else:
|
| 310 |
-
# html_result += (
|
| 311 |
-
# "<li>No specific follow-up recommendations provided.</li>"
|
| 312 |
-
# )
|
| 313 |
-
|
| 314 |
-
# html_result += "</ul>"
|
| 315 |
-
|
| 316 |
-
# # Add confidence note
|
| 317 |
-
# confidence = results.get("severity", {}).get("confidence", 0)
|
| 318 |
-
# html_result += f"""
|
| 319 |
-
# <p><em>Note: This analysis has a confidence level of {confidence:.0%}.
|
| 320 |
-
# Please consult with healthcare professionals for official diagnosis.</em></p>
|
| 321 |
-
# """
|
| 322 |
-
|
| 323 |
-
# return html_result, plot_html
|
| 324 |
-
|
| 325 |
-
# except Exception as e:
|
| 326 |
-
# self.logger.error(f"Error in multimodal analysis: {e}")
|
| 327 |
-
# return f"Error in multimodal analysis: {str(e)}", None
|
| 328 |
-
|
| 329 |
-
# def enhance_image(self, image):
|
| 330 |
-
# """
|
| 331 |
-
# Enhance X-ray image contrast.
|
| 332 |
-
|
| 333 |
-
# Args:
|
| 334 |
-
# image: Image file uploaded through Gradio
|
| 335 |
-
|
| 336 |
-
# Returns:
|
| 337 |
-
# PIL.Image: Enhanced image
|
| 338 |
-
# """
|
| 339 |
-
# try:
|
| 340 |
-
# if image is None:
|
| 341 |
-
# return None
|
| 342 |
-
|
| 343 |
-
# # Save uploaded image to a temporary file
|
| 344 |
-
# temp_dir = tempfile.mkdtemp()
|
| 345 |
-
# temp_path = os.path.join(temp_dir, "upload.png")
|
| 346 |
-
|
| 347 |
-
# if isinstance(image, str):
|
| 348 |
-
# # Copy the file if it's a path
|
| 349 |
-
# from shutil import copyfile
|
| 350 |
-
|
| 351 |
-
# copyfile(image, temp_path)
|
| 352 |
-
# else:
|
| 353 |
-
# # Save if it's a Gradio UploadButton image
|
| 354 |
-
# image.save(temp_path)
|
| 355 |
-
|
| 356 |
-
# # Enhance image
|
| 357 |
-
# self.logger.info(f"Enhancing image: {temp_path}")
|
| 358 |
-
# output_path = os.path.join(temp_dir, "enhanced.png")
|
| 359 |
-
# enhance_xray_image(temp_path, output_path)
|
| 360 |
-
|
| 361 |
-
# # Load enhanced image
|
| 362 |
-
# enhanced = Image.open(output_path)
|
| 363 |
-
# return enhanced
|
| 364 |
-
|
| 365 |
-
# except Exception as e:
|
| 366 |
-
# self.logger.error(f"Error enhancing image: {e}")
|
| 367 |
-
# return image # Return original image on error
|
| 368 |
-
|
| 369 |
-
# def fig_to_html(self, fig):
|
| 370 |
-
# """Convert matplotlib figure to HTML for display in Gradio."""
|
| 371 |
-
# try:
|
| 372 |
-
# import base64
|
| 373 |
-
# import io
|
| 374 |
-
|
| 375 |
-
# buf = io.BytesIO()
|
| 376 |
-
# fig.savefig(buf, format="png", bbox_inches="tight")
|
| 377 |
-
# buf.seek(0)
|
| 378 |
-
# img_str = base64.b64encode(buf.read()).decode("utf-8")
|
| 379 |
-
# plt.close(fig)
|
| 380 |
-
|
| 381 |
-
# return f'<img src="data:image/png;base64,{img_str}" alt="Analysis Plot">'
|
| 382 |
-
|
| 383 |
-
# except Exception as e:
|
| 384 |
-
# self.logger.error(f"Error converting figure to HTML: {e}")
|
| 385 |
-
# return "<p>Error displaying visualization.</p>"
|
| 386 |
-
import logging
|
| 387 |
-
import os
|
| 388 |
-
import sys
|
| 389 |
-
import tempfile
|
| 390 |
-
from pathlib import Path
|
| 391 |
import requests
|
| 392 |
import gradio as gr
|
| 393 |
import matplotlib.pyplot as plt
|
|
@@ -503,7 +118,10 @@ class MediSyncApp:
|
|
| 503 |
|
| 504 |
html_result = f"""
|
| 505 |
<div class="medisync-card medisync-card-bg medisync-force-text">
|
| 506 |
-
<h2 class="medisync-title medisync-blue">
|
|
|
|
|
|
|
|
|
|
| 507 |
<p><strong>Primary Finding:</strong> {results.get("primary_finding", "Unknown")}</p>
|
| 508 |
<p><strong>Confidence:</strong> {results.get("confidence", 0):.1%}</p>
|
| 509 |
<p><strong>Abnormality Detected:</strong> {"Yes" if results.get("has_abnormality", False) else "No"}</p>
|
|
@@ -550,7 +168,10 @@ class MediSyncApp:
|
|
| 550 |
entities_plot_html = self.fig_to_html(fig)
|
| 551 |
html_result = f"""
|
| 552 |
<div class="medisync-card medisync-card-bg medisync-force-text">
|
| 553 |
-
<h2 class="medisync-title medisync-green">
|
|
|
|
|
|
|
|
|
|
| 554 |
<p><strong>Severity Level:</strong> {results.get("severity", {}).get("level", "Unknown")}</p>
|
| 555 |
<p><strong>Severity Score:</strong> {results.get("severity", {}).get("score", 0)}/4</p>
|
| 556 |
<p><strong>Confidence:</strong> {results.get("severity", {}).get("confidence", 0):.1%}</p>
|
|
@@ -617,7 +238,10 @@ class MediSyncApp:
|
|
| 617 |
explanation = self.fusion_model.get_explanation(results)
|
| 618 |
html_result = f"""
|
| 619 |
<div class="medisync-card medisync-card-bg medisync-force-text">
|
| 620 |
-
<h2 class="medisync-title medisync-purple">
|
|
|
|
|
|
|
|
|
|
| 621 |
<h3>Overview</h3>
|
| 622 |
<p><strong>Primary Finding:</strong> {results.get("primary_finding", "Unknown")}</p>
|
| 623 |
<p><strong>Severity Level:</strong> {results.get("severity", {}).get("level", "Unknown")}</p>
|
|
@@ -772,8 +396,14 @@ def create_interface():
|
|
| 772 |
color: var(--body-text-color, #222);
|
| 773 |
}
|
| 774 |
.medisync-title {
|
| 775 |
-
font-weight:
|
|
|
|
| 776 |
margin-bottom: 0.7em;
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 777 |
}
|
| 778 |
.medisync-blue { color: #00bfae; }
|
| 779 |
.medisync-green { color: #28a745; }
|
|
@@ -810,6 +440,7 @@ def create_interface():
|
|
| 810 |
/* Responsive tweaks */
|
| 811 |
@media (max-width: 900px) {
|
| 812 |
.medisync-card { padding: 16px 8px 12px 8px; }
|
|
|
|
| 813 |
}
|
| 814 |
/* Ensure text is visible in dark mode */
|
| 815 |
html[data-theme="dark"] .medisync-card-bg,
|
|
@@ -819,6 +450,7 @@ def create_interface():
|
|
| 819 |
}
|
| 820 |
html[data-theme="dark"] .medisync-title {
|
| 821 |
color: #00bfae !important;
|
|
|
|
| 822 |
}
|
| 823 |
html[data-theme="dark"] .medisync-blue { color: #00bfae !important; }
|
| 824 |
html[data-theme="dark"] .medisync-green { color: #00e676 !important; }
|
|
@@ -837,17 +469,19 @@ def create_interface():
|
|
| 837 |
html[data-theme="dark"] .medisync-force-text, html[data-theme="dark"] .medisync-force-text * {
|
| 838 |
color: #f8fafc !important;
|
| 839 |
}
|
| 840 |
-
/* End consultation status output force text color */
|
| 841 |
#end_consultation_status, #end_consultation_status * {
|
| 842 |
color: var(--body-text-color, #222) !important;
|
|
|
|
| 843 |
}
|
| 844 |
html[data-theme="dark"] #end_consultation_status, html[data-theme="dark"] #end_consultation_status * {
|
| 845 |
color: #f8fafc !important;
|
|
|
|
| 846 |
}
|
| 847 |
/* Style for the popup/status after end consultation for visibility */
|
| 848 |
#end_consultation_status, #end_consultation_status * {
|
| 849 |
-
font-size: 1.
|
| 850 |
-
font-weight:
|
| 851 |
}
|
| 852 |
html[data-theme="dark"] #end_consultation_status, html[data-theme="dark"] #end_consultation_status * {
|
| 853 |
color: #f8fafc !important;
|
|
@@ -871,18 +505,22 @@ def create_interface():
|
|
| 871 |
) as interface:
|
| 872 |
gr.Markdown(
|
| 873 |
"""
|
| 874 |
-
<div style="display: flex; align-items: center; gap:
|
| 875 |
-
<img src="https://cdn.jsdelivr.net/gh/saqib-ali-buriro/medivance-assets/medivance_logo.png" alt="Medivance Logo" style="height:
|
| 876 |
-
<span style="font-size: 2.
|
|
|
|
|
|
|
|
|
|
|
|
|
| 877 |
</div>
|
| 878 |
-
<div style="font-size: 1.
|
| 879 |
<span style="color: var(--body-text-color, #222);">AI-powered Multi-Modal Medical Analysis System</span>
|
| 880 |
</div>
|
| 881 |
-
<div style="font-size: 1.
|
| 882 |
<span style="color: var(--body-text-color, #222);">Seamlessly analyze X-ray images and medical reports for comprehensive healthcare insights.</span>
|
| 883 |
</div>
|
| 884 |
<div style="margin-bottom: 1.2em;">
|
| 885 |
-
<ul style="font-size: 1.
|
| 886 |
<li>Upload a chest X-ray image</li>
|
| 887 |
<li>Enter the corresponding medical report text</li>
|
| 888 |
<li>Choose the analysis type: <b>Image</b>, <b>Text</b>, or <b>Multimodal</b></li>
|
|
@@ -988,7 +626,10 @@ def create_interface():
|
|
| 988 |
gr.Markdown(
|
| 989 |
"""
|
| 990 |
<div class="medisync-card medisync-card-bg medisync-force-text">
|
| 991 |
-
<h2 class="medisync-title medisync-blue">
|
|
|
|
|
|
|
|
|
|
| 992 |
<p>
|
| 993 |
<b>MediSync</b> is an AI-powered healthcare solution that uses multi-modal analysis to provide comprehensive insights from medical images and reports.
|
| 994 |
</p>
|
|
@@ -1033,15 +674,16 @@ def create_interface():
|
|
| 1033 |
)
|
| 1034 |
|
| 1035 |
def handle_end_consultation(appointment_id):
|
|
|
|
| 1036 |
if not appointment_id or appointment_id.strip() == "":
|
| 1037 |
-
return "<div class='medisync-force-text' style='color: #dc3545; padding: 10px; background-color: #ffe6e6; border-radius: 5px;'>Please enter your appointment ID first.</div>"
|
| 1038 |
result = complete_appointment(appointment_id.strip())
|
| 1039 |
if result["status"] == "success":
|
| 1040 |
doctors_urls = get_doctors_page_urls()
|
| 1041 |
html_response = f"""
|
| 1042 |
-
<div class='medisync-force-text' style='color: #28a745; padding: 15px; background-color: #e6ffe6; border-radius: 5px; margin: 10px 0;">
|
| 1043 |
<h3 style="color: #28a745;">✅ Consultation Completed Successfully!</h3>
|
| 1044 |
-
<p style="color: var(--body-text-color, #222);"
|
| 1045 |
<p style="color: var(--body-text-color, #222);">Your appointment has been marked as completed.</p>
|
| 1046 |
<button onclick="window.open('{doctors_urls['local']}', '_blank')"
|
| 1047 |
style="background-color: #00bfae; color: white; padding: 8px 18px; border: none; border-radius: 6px; cursor: pointer; margin-top: 10px;">
|
|
@@ -1056,7 +698,7 @@ def create_interface():
|
|
| 1056 |
else:
|
| 1057 |
if "Cannot connect to Flask app" in result['message']:
|
| 1058 |
html_response = f"""
|
| 1059 |
-
<div class='medisync-force-text' style='color: #ff9800; padding: 15px; background-color: #fff3cd; border-radius: 5px; margin: 10px 0;">
|
| 1060 |
<h3 style="color: #ff9800;">⚠️ Consultation Ready to Complete</h3>
|
| 1061 |
<p style="color: var(--body-text-color, #222);">Your consultation analysis is complete! However, we cannot automatically mark your appointment as completed because the Flask app is not accessible from this environment.</p>
|
| 1062 |
<p style="color: var(--body-text-color, #222);"><strong>Appointment ID:</strong> {appointment_id.strip()}</p>
|
|
@@ -1084,7 +726,7 @@ def create_interface():
|
|
| 1084 |
"""
|
| 1085 |
else:
|
| 1086 |
html_response = f"""
|
| 1087 |
-
<div class='medisync-force-text' style='color: #dc3545; padding: 15px; background-color: #ffe6e6; border-radius: 5px; margin: 10px 0;">
|
| 1088 |
<h3 style="color: #dc3545;">❌ Error Completing Consultation</h3>
|
| 1089 |
<p style="color: var(--body-text-color, #222);">{result['message']}</p>
|
| 1090 |
<p style="color: var(--body-text-color, #222);">Please try again or contact support if the problem persists.</p>
|
|
|
|
| 3 |
import sys
|
| 4 |
import tempfile
|
| 5 |
from pathlib import Path
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 6 |
import requests
|
| 7 |
import gradio as gr
|
| 8 |
import matplotlib.pyplot as plt
|
|
|
|
| 118 |
|
| 119 |
html_result = f"""
|
| 120 |
<div class="medisync-card medisync-card-bg medisync-force-text">
|
| 121 |
+
<h2 class="medisync-title medisync-blue">
|
| 122 |
+
<img src="https://cdn.jsdelivr.net/gh/saqib-ali-buriro/medivance-assets/xray_icon.png" alt="X-ray" style="height:32px;vertical-align:middle;margin-right:10px;">
|
| 123 |
+
<span style="font-size:1.45em; font-weight:900; letter-spacing:1px; text-shadow:0 2px 8px #00bfae33;">X-ray Analysis Results</span>
|
| 124 |
+
</h2>
|
| 125 |
<p><strong>Primary Finding:</strong> {results.get("primary_finding", "Unknown")}</p>
|
| 126 |
<p><strong>Confidence:</strong> {results.get("confidence", 0):.1%}</p>
|
| 127 |
<p><strong>Abnormality Detected:</strong> {"Yes" if results.get("has_abnormality", False) else "No"}</p>
|
|
|
|
| 168 |
entities_plot_html = self.fig_to_html(fig)
|
| 169 |
html_result = f"""
|
| 170 |
<div class="medisync-card medisync-card-bg medisync-force-text">
|
| 171 |
+
<h2 class="medisync-title medisync-green">
|
| 172 |
+
<img src="https://cdn.jsdelivr.net/gh/saqib-ali-buriro/medivance-assets/report_icon.png" alt="Report" style="height:32px;vertical-align:middle;margin-right:10px;">
|
| 173 |
+
<span style="font-size:1.45em; font-weight:900; letter-spacing:1px; text-shadow:0 2px 8px #28a74533;">Text Analysis Results</span>
|
| 174 |
+
</h2>
|
| 175 |
<p><strong>Severity Level:</strong> {results.get("severity", {}).get("level", "Unknown")}</p>
|
| 176 |
<p><strong>Severity Score:</strong> {results.get("severity", {}).get("score", 0)}/4</p>
|
| 177 |
<p><strong>Confidence:</strong> {results.get("severity", {}).get("confidence", 0):.1%}</p>
|
|
|
|
| 238 |
explanation = self.fusion_model.get_explanation(results)
|
| 239 |
html_result = f"""
|
| 240 |
<div class="medisync-card medisync-card-bg medisync-force-text">
|
| 241 |
+
<h2 class="medisync-title medisync-purple">
|
| 242 |
+
<img src="https://cdn.jsdelivr.net/gh/saqib-ali-buriro/medivance-assets/multimodal_icon.png" alt="Multimodal" style="height:32px;vertical-align:middle;margin-right:10px;">
|
| 243 |
+
<span style="font-size:1.45em; font-weight:900; letter-spacing:1px; text-shadow:0 2px 8px #6c63ff33;">Multimodal Analysis Results</span>
|
| 244 |
+
</h2>
|
| 245 |
<h3>Overview</h3>
|
| 246 |
<p><strong>Primary Finding:</strong> {results.get("primary_finding", "Unknown")}</p>
|
| 247 |
<p><strong>Severity Level:</strong> {results.get("severity", {}).get("level", "Unknown")}</p>
|
|
|
|
| 396 |
color: var(--body-text-color, #222);
|
| 397 |
}
|
| 398 |
.medisync-title {
|
| 399 |
+
font-weight: 900;
|
| 400 |
+
font-size: 1.45em;
|
| 401 |
margin-bottom: 0.7em;
|
| 402 |
+
letter-spacing: 1px;
|
| 403 |
+
text-shadow: 0 2px 8px #00bfae33, 0 1px 0 #fff;
|
| 404 |
+
display: flex;
|
| 405 |
+
align-items: center;
|
| 406 |
+
gap: 10px;
|
| 407 |
}
|
| 408 |
.medisync-blue { color: #00bfae; }
|
| 409 |
.medisync-green { color: #28a745; }
|
|
|
|
| 440 |
/* Responsive tweaks */
|
| 441 |
@media (max-width: 900px) {
|
| 442 |
.medisync-card { padding: 16px 8px 12px 8px; }
|
| 443 |
+
.medisync-title { font-size: 1.1em; }
|
| 444 |
}
|
| 445 |
/* Ensure text is visible in dark mode */
|
| 446 |
html[data-theme="dark"] .medisync-card-bg,
|
|
|
|
| 450 |
}
|
| 451 |
html[data-theme="dark"] .medisync-title {
|
| 452 |
color: #00bfae !important;
|
| 453 |
+
text-shadow: 0 2px 8px #00bfae33, 0 1px 0 #23272f;
|
| 454 |
}
|
| 455 |
html[data-theme="dark"] .medisync-blue { color: #00bfae !important; }
|
| 456 |
html[data-theme="dark"] .medisync-green { color: #00e676 !important; }
|
|
|
|
| 469 |
html[data-theme="dark"] .medisync-force-text, html[data-theme="dark"] .medisync-force-text * {
|
| 470 |
color: #f8fafc !important;
|
| 471 |
}
|
| 472 |
+
/* End consultation status output force text color and background for visibility */
|
| 473 |
#end_consultation_status, #end_consultation_status * {
|
| 474 |
color: var(--body-text-color, #222) !important;
|
| 475 |
+
background: #fff !important;
|
| 476 |
}
|
| 477 |
html[data-theme="dark"] #end_consultation_status, html[data-theme="dark"] #end_consultation_status * {
|
| 478 |
color: #f8fafc !important;
|
| 479 |
+
background: #23272f !important;
|
| 480 |
}
|
| 481 |
/* Style for the popup/status after end consultation for visibility */
|
| 482 |
#end_consultation_status, #end_consultation_status * {
|
| 483 |
+
font-size: 1.12rem !important;
|
| 484 |
+
font-weight: 600 !important;
|
| 485 |
}
|
| 486 |
html[data-theme="dark"] #end_consultation_status, html[data-theme="dark"] #end_consultation_status * {
|
| 487 |
color: #f8fafc !important;
|
|
|
|
| 505 |
) as interface:
|
| 506 |
gr.Markdown(
|
| 507 |
"""
|
| 508 |
+
<div style="display: flex; align-items: center; gap: 18px; margin-bottom: 0.5em;">
|
| 509 |
+
<img src="https://cdn.jsdelivr.net/gh/saqib-ali-buriro/medivance-assets/medivance_logo.png" alt="Medivance Logo" style="height: 48px; border-radius: 10px; background: #fff; box-shadow: 0 2px 8px 0 rgba(26,115,232,0.10);">
|
| 510 |
+
<span style="font-size: 2.4rem; font-weight: 900; color: #00bfae; letter-spacing: 1.5px; text-shadow: 0 2px 8px #00bfae33, 0 1px 0 #fff;">
|
| 511 |
+
MediSync
|
| 512 |
+
<img src="https://cdn.jsdelivr.net/gh/saqib-ali-buriro/medivance-assets/ai_heartbeat.png" alt="AI Heartbeat" style="height: 32px; vertical-align: middle; margin-left: 8px;">
|
| 513 |
+
</span>
|
| 514 |
+
<img src="https://cdn.jsdelivr.net/gh/saqib-ali-buriro/medivance-assets/doctor_icon.png" alt="Doctor" style="height: 38px; border-radius: 8px; background: #fff; box-shadow: 0 2px 8px 0 rgba(26,115,232,0.10); margin-left: 8px;">
|
| 515 |
</div>
|
| 516 |
+
<div style="font-size: 1.22rem; margin-bottom: 1.2em; font-weight: 600; color: #23272f;">
|
| 517 |
<span style="color: var(--body-text-color, #222);">AI-powered Multi-Modal Medical Analysis System</span>
|
| 518 |
</div>
|
| 519 |
+
<div style="font-size: 1.09rem; margin-bottom: 1.2em;">
|
| 520 |
<span style="color: var(--body-text-color, #222);">Seamlessly analyze X-ray images and medical reports for comprehensive healthcare insights.</span>
|
| 521 |
</div>
|
| 522 |
<div style="margin-bottom: 1.2em;">
|
| 523 |
+
<ul style="font-size: 1.04rem; color: var(--body-text-color, #222);">
|
| 524 |
<li>Upload a chest X-ray image</li>
|
| 525 |
<li>Enter the corresponding medical report text</li>
|
| 526 |
<li>Choose the analysis type: <b>Image</b>, <b>Text</b>, or <b>Multimodal</b></li>
|
|
|
|
| 626 |
gr.Markdown(
|
| 627 |
"""
|
| 628 |
<div class="medisync-card medisync-card-bg medisync-force-text">
|
| 629 |
+
<h2 class="medisync-title medisync-blue">
|
| 630 |
+
<img src="https://cdn.jsdelivr.net/gh/saqib-ali-buriro/medivance-assets/info_icon.png" alt="Info" style="height:32px;vertical-align:middle;margin-right:10px;">
|
| 631 |
+
<span style="font-size:1.45em; font-weight:900; letter-spacing:1px; text-shadow:0 2px 8px #00bfae33;">About MediSync</span>
|
| 632 |
+
</h2>
|
| 633 |
<p>
|
| 634 |
<b>MediSync</b> is an AI-powered healthcare solution that uses multi-modal analysis to provide comprehensive insights from medical images and reports.
|
| 635 |
</p>
|
|
|
|
| 674 |
)
|
| 675 |
|
| 676 |
def handle_end_consultation(appointment_id):
|
| 677 |
+
# Always force text color and background for visibility
|
| 678 |
if not appointment_id or appointment_id.strip() == "":
|
| 679 |
+
return "<div class='medisync-force-text' style='color: #dc3545; background: #fff; padding: 10px; background-color: #ffe6e6; border-radius: 5px;'>Please enter your appointment ID first.</div>"
|
| 680 |
result = complete_appointment(appointment_id.strip())
|
| 681 |
if result["status"] == "success":
|
| 682 |
doctors_urls = get_doctors_page_urls()
|
| 683 |
html_response = f"""
|
| 684 |
+
<div class='medisync-force-text' style='color: #28a745; background: #fff; padding: 15px; background-color: #e6ffe6; border-radius: 5px; margin: 10px 0;">
|
| 685 |
<h3 style="color: #28a745;">✅ Consultation Completed Successfully!</h3>
|
| 686 |
+
<p style="color: var(--body-text-color, #222);">✔️ {result['message']}</p>
|
| 687 |
<p style="color: var(--body-text-color, #222);">Your appointment has been marked as completed.</p>
|
| 688 |
<button onclick="window.open('{doctors_urls['local']}', '_blank')"
|
| 689 |
style="background-color: #00bfae; color: white; padding: 8px 18px; border: none; border-radius: 6px; cursor: pointer; margin-top: 10px;">
|
|
|
|
| 698 |
else:
|
| 699 |
if "Cannot connect to Flask app" in result['message']:
|
| 700 |
html_response = f"""
|
| 701 |
+
<div class='medisync-force-text' style='color: #ff9800; background: #fff; padding: 15px; background-color: #fff3cd; border-radius: 5px; margin: 10px 0;">
|
| 702 |
<h3 style="color: #ff9800;">⚠️ Consultation Ready to Complete</h3>
|
| 703 |
<p style="color: var(--body-text-color, #222);">Your consultation analysis is complete! However, we cannot automatically mark your appointment as completed because the Flask app is not accessible from this environment.</p>
|
| 704 |
<p style="color: var(--body-text-color, #222);"><strong>Appointment ID:</strong> {appointment_id.strip()}</p>
|
|
|
|
| 726 |
"""
|
| 727 |
else:
|
| 728 |
html_response = f"""
|
| 729 |
+
<div class='medisync-force-text' style='color: #dc3545; background: #fff; padding: 15px; background-color: #ffe6e6; border-radius: 5px; margin: 10px 0;">
|
| 730 |
<h3 style="color: #dc3545;">❌ Error Completing Consultation</h3>
|
| 731 |
<p style="color: var(--body-text-color, #222);">{result['message']}</p>
|
| 732 |
<p style="color: var(--body-text-color, #222);">Please try again or contact support if the problem persists.</p>
|