feat: change form
Browse files
app.py
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@@ -3,6 +3,8 @@ import numpy as np
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import gradio as gr
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import requests
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import json
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# Store the server's URL
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SERVER_URL = "https://ppaihack-match.azurewebsites.net/"
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@@ -25,7 +27,7 @@ additional_categories = {
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"Ethnicity": ["White", "Black or African American", "Asian", "American Indian or Alaska Native", "Native Hawaiian or Other Pacific Islander", "Other"],
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"Geographic_Location": ["North America", "South America", "Europe", "Asia", "Africa", "Australia", "Antarctica"],
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"Smoking_Status": ["Never", "Former", "Current"],
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"Diagnoses_ICD10": ["
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"Medications": ["Metformin", "Lisinopril", "Atorvastatin", "Amlodipine", "Omeprazole", "Simvastatin", "Levothyroxine", "None"],
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"Allergies": ["Penicillin", "Peanuts", "Shellfish", "Latex", "Bee stings", "None"],
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"Previous_Treatments": ["Chemotherapy", "Radiation Therapy", "Surgery", "Physical Therapy", "Immunotherapy", "None"],
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@@ -41,7 +43,6 @@ age_input = gr.Slider(minimum=18, maximum=100, label="Age ", step=1)
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gender_input = gr.Radio(choices=additional_categories["Gender"], label="Gender")
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ethnicity_input = gr.Radio(choices=additional_categories["Ethnicity"], label="Ethnicity")
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geographic_location_input = gr.Radio(choices=additional_categories["Geographic_Location"], label="Geographic Location")
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diagnoses_icd10_input = gr.CheckboxGroup(choices=additional_categories["Diagnoses_ICD10"], label="Diagnoses (ICD-10)")
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medications_input = gr.CheckboxGroup(choices=additional_categories["Medications"], label="Medications")
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allergies_input = gr.CheckboxGroup(choices=additional_categories["Allergies"], label="Allergies")
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previous_treatments_input = gr.CheckboxGroup(choices=additional_categories["Previous_Treatments"], label="Previous Treatments")
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@@ -213,17 +214,54 @@ def process_patient_data(age, gender, ethnicity, geographic_location, diagnoses_
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# f"Encrypted data: {encrypted_array}",
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f"Decrypted result: {response.json()}"
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# Create the Gradio interface
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# Launch the app
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demo.launch()
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import gradio as gr
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import requests
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import json
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from transformers import ViTImageProcessor, ViTModel
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from PIL import Image
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# Store the server's URL
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SERVER_URL = "https://ppaihack-match.azurewebsites.net/"
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"Ethnicity": ["White", "Black or African American", "Asian", "American Indian or Alaska Native", "Native Hawaiian or Other Pacific Islander", "Other"],
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"Geographic_Location": ["North America", "South America", "Europe", "Asia", "Africa", "Australia", "Antarctica"],
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"Smoking_Status": ["Never", "Former", "Current"],
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"Diagnoses_ICD10": ["Actinic keratosis", "Melanoma", "Dermatofibroma", "Vascular lesion","None"],
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"Medications": ["Metformin", "Lisinopril", "Atorvastatin", "Amlodipine", "Omeprazole", "Simvastatin", "Levothyroxine", "None"],
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"Allergies": ["Penicillin", "Peanuts", "Shellfish", "Latex", "Bee stings", "None"],
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"Previous_Treatments": ["Chemotherapy", "Radiation Therapy", "Surgery", "Physical Therapy", "Immunotherapy", "None"],
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gender_input = gr.Radio(choices=additional_categories["Gender"], label="Gender")
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ethnicity_input = gr.Radio(choices=additional_categories["Ethnicity"], label="Ethnicity")
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geographic_location_input = gr.Radio(choices=additional_categories["Geographic_Location"], label="Geographic Location")
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medications_input = gr.CheckboxGroup(choices=additional_categories["Medications"], label="Medications")
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allergies_input = gr.CheckboxGroup(choices=additional_categories["Allergies"], label="Allergies")
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previous_treatments_input = gr.CheckboxGroup(choices=additional_categories["Previous_Treatments"], label="Previous Treatments")
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# f"Encrypted data: {encrypted_array}",
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f"Decrypted result: {response.json()}"
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# Define the function to handle image upload
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def handle_image_upload(image):
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url = 'http://images.cocodataset.org/val2017/000000039769.jpg'
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image = Image.open(requests.get(url, stream=True).raw)
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processor = ViTImageProcessor.from_pretrained('google/vit-base-patch16-224-in21k')
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model = ViTModel.from_pretrained('google/vit-base-patch16-224-in21k')
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inputs = processor(images=image, return_tensors="pt")
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outputs = model(**inputs)
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pooler_output = outputs.pooler_output[0]
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sclaed_output = 127 + 127 * pooler_output / pooler_output.abs().max()
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sclaed_output = sclaed_output.to(int)
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return ["Melanoma", "Vascular lesion"]
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# Create the Gradio interface
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with gr.Blocks() as demo:
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gr.Markdown("# Patient Data Criteria Form\nPlease fill in the criteria for the type of patients you are looking for.")
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with gr.Column():
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with gr.Group():
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age_input.render()
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gender_input.render()
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ethnicity_input.render()
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geographic_location_input.render()
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medications_input.render()
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allergies_input.render()
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previous_treatments_input.render()
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blood_glucose_level_input.render()
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blood_pressure_systolic_input.render()
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blood_pressure_diastolic_input.render()
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bmi_input.render()
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smoking_status_input.render()
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alcohol_consumption_input.render()
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exercise_habits_input.render()
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diet_input.render()
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condition_severity_input.render()
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functional_status_input.render()
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previous_trial_participation_input.render()
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with gr.Group():
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diagnoses_icd10_input = gr.CheckboxGroup(choices=additional_categories["Diagnoses_ICD10"], label="Skin Diagnosis", interactive=False)
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image_input = gr.Image(label="Upload an Image")
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gr.Button("Upload").click(handle_image_upload, inputs=image_input, outputs=diagnoses_icd10_input)
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with gr.Group():
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output = gr.JSON(label="Patient Data JSON")
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gr.Button("Submit").click(process_patient_data, inputs=[
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age_input, gender_input, ethnicity_input, geographic_location_input, diagnoses_icd10_input, medications_input, allergies_input, previous_treatments_input, blood_glucose_level_input, blood_pressure_systolic_input, blood_pressure_diastolic_input, bmi_input, smoking_status_input, alcohol_consumption_input, exercise_habits_input, diet_input, condition_severity_input, functional_status_input, previous_trial_participation_input
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], outputs=output)
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# Launch the app
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demo.launch()
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